Information for 2-CCCAGAGCGT (Motif 9)

A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A G T C A C G T A G T C A C G T A C T G A C T G A C T G
p-value:1e-3
log p-value:-8.182e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets229.0 +/- 0.0bp
Average Position of motif in Background185.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCCAGAGCGT
--CGGAGC--
 A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C A C T G A C G T
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCCAGAGCGT
----CAGCC-
 A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C A C T G A C G T
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

dpy-27/MA0540.1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCCAGAGCGT---
TCTCCCTGCGCGATAA
 A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A G C T A T C G C A G T G A T C A G T C A G T C A C G T A C T G A G T C A C T G A G T C A C T G C G T A C G A T C G T A T C G A

sma-4/MA0925.1/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGAGCGT
NNCCAGACANN
 A C G T A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C A C T G A C G T
A C T G A G C T G T A C A G T C C G T A A C T G C G T A G T A C C G T A A G T C A C G T

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:5
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CCCAGAGCGT
--TAGCGCGC
 A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C A C T G A C G T
A C G T A C G T C G A T C T G A C T A G G T A C A C T G A G T C C T A G A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CCCAGAGCGT
CACAGN----
 A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C A C T G A C G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer

Match Rank:7
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:CCCAGAGCGT-------
--TRGAGCGCRYTTGCA
 A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T T C A G T C A G T C G A A C T G A G T C C T A G G A T C T C A G A G C T G C A T G A C T C A T G G T A C C G T A

PL0012.1_hlh-2::hlh-8/Jaspar

Match Rank:8
Score:0.43
Offset:-3
Orientation:reverse strand
Alignment:---CCCAGAGCGT---
NANACCAGATGTTTNN
 A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C A T G T G C A G C A T C T G A T G A C T G A C C G T A A C T G T C G A A C G T C A T G A C G T A C G T A C G T T C G A G A C T

lin-14/MA0261.1/Jaspar

Match Rank:9
Score:0.42
Offset:4
Orientation:forward strand
Alignment:CCCAGAGCGT
----GAACAC
 A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C C T G A A G T C

MA0261.1_lin-14/Jaspar

Match Rank:10
Score:0.42
Offset:4
Orientation:forward strand
Alignment:CCCAGAGCGT
----GAACAC
 A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C C T G A A G T C