Information for 5-TGMCTVMGCTCC (Motif 7)

A C G T A C T G G T A C G A T C A C G T T C A G G T A C A C T G A G T C A C G T A T G C G A T C
Reverse Opposite:
C T A G A T C G C G T A C T A G A G T C A C T G A G C T G T C A C A T G A C T G A G T C T C G A
p-value:1e-4
log p-value:-1.101e+01
Information Content per bp:1.652
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif609.2
Percentage of Background Sequences with motif1.70%
Average Position of motif in Targets335.5 +/- 224.6bp
Average Position of motif in Background489.9 +/- 294.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.67
Offset:7
Orientation:forward strand
Alignment:TGMCTVMGCTCC-
-------GCTCCG
 A C G T A C T G G T A C G A T C A C G T T C A G G T A C A C T G A G T C A C G T A T G C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:TGMCTVMGCTCC
------NGCTN-
 A C G T A C T G G T A C G A T C A C G T T C A G G T A C A C T G A G T C A C G T A T G C G A T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

lin-14/MA0261.1/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TGMCTVMGCTCC
-----GTGTTC-
 A C G T A C T G G T A C G A T C A C G T T C A G G T A C A C T G A G T C A C G T A T G C G A T C
A C G T A C G T A C G T A C G T A C G T T C A G G A C T A C T G A C G T A C G T A G T C A C G T

MA0261.1_lin-14/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TGMCTVMGCTCC
-----GTGTTC-
 A C G T A C T G G T A C G A T C A C G T T C A G G T A C A C T G A G T C A C G T A T G C G A T C
A C G T A C G T A C G T A C G T A C G T T C A G G A C T A C T G A C G T A C G T A G T C A C G T

sma-4/MA0925.1/Jaspar

Match Rank:5
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--TGMCTVMGCTCC
AGTGTCTGGAC---
 A C G T A C G T A C G T A C T G G T A C G A T C A C G T T C A G G T A C A C T G A G T C A C G T A T G C G A T C
C G T A T C A G A C G T A C T G C G A T A G T C A C G T C T A G A C T G T C G A A G T C A C G T A C G T A C G T

fos-1/MA1448.1/Jaspar

Match Rank:6
Score:0.48
Offset:0
Orientation:forward strand
Alignment:TGMCTVMGCTCC
TGACTCA-----
 A C G T A C T G G T A C G A T C A C G T T C A G G T A C A C T G A G T C A C G T A T G C G A T C
A C G T A C T G C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.46
Offset:-5
Orientation:reverse strand
Alignment:-----TGMCTVMGCTCC
NNACTTGCCTT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C G A T C A C G T T C A G G T A C A C T G A G T C A C G T A T G C G A T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer

Match Rank:8
Score:0.45
Offset:-2
Orientation:forward strand
Alignment:--TGMCTVMGCTCC-
TGCAARYGCGCTCYA
 A C G T A C G T A C G T A C T G G T A C G A T C A C G T T C A G G T A C A C T G A G T C A C G T A T G C G A T C A C G T
G C A T C A T G G T A C C T G A C G T A C T G A A G T C C T A G A G T C A C T G A G T C A G C T A G T C A G T C C T G A

che-1/MA0260.1/Jaspar

Match Rank:9
Score:0.44
Offset:6
Orientation:reverse strand
Alignment:TGMCTVMGCTCC
------GGTTTC
 A C G T A C T G G T A C G A T C A C G T T C A G G T A C A C T G A G T C A C G T A T G C G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A G C T A C G T A C G T A G T C

MA0260.1_che-1/Jaspar

Match Rank:10
Score:0.44
Offset:6
Orientation:reverse strand
Alignment:TGMCTVMGCTCC
------GGTTTC
 A C G T A C T G G T A C G A T C A C G T T C A G G T A C A C T G A G T C A C G T A T G C G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A G C T A C G T A C G T A G T C