Information for 2-ACGTTAGA (Motif 5)

T C G A A G T C A C T G A C G T A G C T C G T A A C T G C G T A
Reverse Opposite:
A C G T G T A C A C G T C T G A C G T A A G T C A C T G A G C T
p-value:1e-6
log p-value:-1.399e+01
Information Content per bp:1.884
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif60.00%
Number of Background Sequences with motif1455.9
Percentage of Background Sequences with motif4.07%
Average Position of motif in Targets573.8 +/- 314.5bp
Average Position of motif in Background519.7 +/- 320.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACGTTAGA
ACGTCA--
 T C G A A G T C A C T G A C G T A G C T C G T A A C T G C G T A
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T

zip-8/MA1704.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACGTTAGA-
TGACGTCATNN
 A C G T A C G T T C G A A G T C A C T G A C G T A G C T C G T A A C T G C G T A A C G T
G A C T A C T G C T G A A G T C C A T G G A C T G T A C C G T A A G C T G T C A C T G A

atf-7/MA1438.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACGTTAGA
TGACGTCATN
 A C G T A C G T T C G A A G T C A C T G A C G T A G C T C G T A A C T G C G T A
A C G T A T C G C T G A A G T C T C A G G C A T A G T C C T G A A G C T C G A T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ACGTTAGA--
CAGGTAAGTAT
 A C G T T C G A A G T C A C T G A C G T A G C T C G T A A C T G C G T A A C G T A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

hlh-30/MA1449.1/Jaspar

Match Rank:5
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----ACGTTAGA
AATCACGTGATT
 A C G T A C G T A C G T A C G T T C G A A G T C A C T G A C G T A G C T C G T A A C T G C G T A
C G T A C T G A G A C T A T G C G C T A A G T C T C A G C G A T A T C G C T G A G A C T G C A T

PL0014.1_mxl-1::mdl-1/Jaspar

Match Rank:6
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------ACGTTAGA--
TATACCACGTGCTAAC
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C A C T G A C G T A G C T C G T A A C T G C G T A A C G T A C G T
G A C T C G T A C G A T C T G A A T C G A G T C C G T A A G T C C T A G A G C T A C T G T A G C A C G T T C G A G C T A A G T C

PL0005.1_hlh-30/Jaspar

Match Rank:7
Score:0.50
Offset:-7
Orientation:reverse strand
Alignment:-------ACGTTAGA--
NNNNGTCACGTGATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C A C T G A C G T A G C T C G T A A C T G C G T A A C G T A C G T
T C G A G C T A C G A T C G A T C T A G G A C T A G T C C G T A A G T C C T A G C G A T C T A G C T G A G A C T G C A T T A G C C G A T

lin-14/MA0261.1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:ACGTTAGA
GTGTTC--
 T C G A A G T C A C T G A C G T A G C T C G T A A C T G C G T A
T C A G G A C T A C T G A C G T A C G T A G T C A C G T A C G T

MA0261.1_lin-14/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:ACGTTAGA
GTGTTC--
 T C G A A G T C A C T G A C G T A G C T C G T A A C T G C G T A
T C A G G A C T A C T G A C G T A C G T A G T C A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---ACGTTAGA
TGTCGGTT---
 A C G T A C G T A C G T T C G A A G T C A C T G A C G T A G C T C G T A A C T G C G T A
C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T A C G T A C G T