Information for 20-GTCCAGTCGC (Motif 41)

A C T G A C G T A G T C A G T C C G T A A C T G A C G T A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G C G T A A G T C A C G T A C T G A C T G C G T A A G T C
p-value:1e-3
log p-value:-7.084e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets741.0 +/- 0.0bp
Average Position of motif in Background194.1 +/- 253.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ceh-22/MA0264.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTCCAGTCGC
TTTCAAGTGGN
 A C G T A C T G A C G T A G T C A G T C C G T A A C T G A C G T A G T C A C T G A G T C
A C G T A C G T C G A T A T G C C T G A C G T A A C T G C G A T C T A G A T C G G A C T

MA0264.1_ceh-22/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTCCAGTCGC
TTTCAAGTGGN
 A C G T A C T G A C G T A G T C A G T C C G T A A C T G A C G T A G T C A C T G A G T C
A C G T A C G T C G A T A T G C C T G A C G T A A C T G C G A T C T A G A T C G G A C T

sma-4/MA0925.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTCCAGTCGC-
NNCCAGACANN
 A C T G A C G T A G T C A G T C C G T A A C T G A C G T A G T C A C T G A G T C A C G T
A C T G A G C T G T A C A G T C C G T A A C T G C G T A G T A C C G T A A G T C A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTCCAGTCGC
ACTAGCCAATCA-
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C T G A C G T A G T C A C T G A G T C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

dpy-27/MA0540.1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GTCCAGTCGC-----
TCTCCCTGCGCGATAA
 A C G T A C T G A C G T A G T C A G T C C G T A A C T G A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A G C T A T C G C A G T G A T C A G T C A G T C A C G T A C T G A G T C A C T G A G T C A C T G C G T A C G A T C G T A T C G A

POL002.1_INR/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTCCAGTCGC
--TCAGTCTT
 A C T G A C G T A G T C A G T C C G T A A C T G A C G T A G T C A C T G A G T C
A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

MF0001.1_ETS_class/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GTCCAGTCGC
CTTCCGGT---
 A C G T A C T G A C G T A G T C A G T C C G T A A C T G A C G T A G T C A C T G A G T C
A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.44
Offset:-2
Orientation:forward strand
Alignment:--GTCCAGTCGC
AAGGCAAGTGT-
 A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C T G A C G T A G T C A C T G A G T C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

PL0013.1_hlh-2::hlh-15/Jaspar

Match Rank:9
Score:0.43
Offset:-3
Orientation:reverse strand
Alignment:---GTCCAGTCGC---
AGGGCCCAGCTGNTNN
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C T G A C G T A G T C A C T G A G T C A C G T A C G T A C G T
T G C A A C T G C A T G T A C G G T A C T A G C T G A C C G T A A T C G T A G C C G A T C A T G A T C G A C G T A G T C G A T C

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.43
Offset:-1
Orientation:reverse strand
Alignment:-GTCCAGTCGC
GGTCCCGCCC-
 A C G T A C T G A C G T A G T C A G T C C G T A A C T G A C G T A G T C A C T G A G T C
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T