Information for 18-GGTACGGGGT (Motif 39)

A C T G A C T G A C G T C G T A A G T C A C T G A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C A G T C A C T G A C G T C G T A A G T C A G T C
p-value:1e-3
log p-value:-7.084e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets814.0 +/- 0.0bp
Average Position of motif in Background485.5 +/- 216.2bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGTACGGGGT
CAGGTAAGTAT-
 A C G T A C G T A C T G A C T G A C G T C G T A A G T C A C T G A C T G A C T G A C T G A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T

PL0016.1_ref-1/Jaspar

Match Rank:2
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----GGTACGGGGT---
TCAAGGCACGTGCCTTA
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A G T C A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C G A T T G A C G C T A G C T A C T A G T C A G A G T C C T G A A G T C C T A G A G C T A C T G A G T C G A T C G C A T C G A T C G T A

PL0014.1_mxl-1::mdl-1/Jaspar

Match Rank:3
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GGTACGGGGT---
NNTNGCACGTGCTNNA
 A C G T A C G T A C G T A C T G A C T G A C G T C G T A A G T C A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T
T A C G C G A T A C G T T G C A A T C G A G T C C T G A A G T C C T A G C G A T A C T G A T C G G A C T G C T A G C A T C T G A

PL0007.1_mxl-3/Jaspar

Match Rank:4
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---GGTACGGGGT---
NNNACCACGTGGTNNN
 A C G T A C G T A C G T A C T G A C T G A C G T C G T A A G T C A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T
G A T C C A T G T C A G C T G A T G A C G T A C C G T A A G T C C T A G G A C T A C T G A C T G A G C T G T A C G A T C T C A G

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GGTACGGGGT--
AGGGGGCGGGGCTG
 A C G T A C G T A C T G A C T G A C G T C G T A A G T C A C T G A C T G A C T G A C T G A C G T A C G T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:6
Score:0.45
Offset:2
Orientation:reverse strand
Alignment:GGTACGGGGT
--CACGTGNT
 A C T G A C T G A C G T C G T A A G T C A C T G A C T G A C T G A C T G A C G T
A C G T A C G T G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.45
Offset:6
Orientation:forward strand
Alignment:GGTACGGGGT--
------AGGTCA
 A C T G A C T G A C G T C G T A A G T C A C T G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

PL0009.1_hlh-26/Jaspar

Match Rank:8
Score:0.43
Offset:-3
Orientation:forward strand
Alignment:---GGTACGGGGT----
TATGGCACGTGTCCAAT
 A C G T A C G T A C G T A C T G A C T G A C G T C G T A A G T C A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G C A T C A T G T C A G A G T C C T G A A G T C C T A G G A C T A C T G A G C T G A T C G A T C G C T A T G C A C G A T

lin-14/MA0261.1/Jaspar

Match Rank:9
Score:0.41
Offset:1
Orientation:forward strand
Alignment:GGTACGGGGT
-GAACAC---
 A C T G A C T G A C G T C G T A A G T C A C T G A C T G A C T G A C T G A C G T
A C G T A C T G C G T A C G T A A G T C C T G A A G T C A C G T A C G T A C G T

MA0261.1_lin-14/Jaspar

Match Rank:10
Score:0.41
Offset:1
Orientation:forward strand
Alignment:GGTACGGGGT
-GAACAC---
 A C T G A C T G A C G T C G T A A G T C A C T G A C T G A C T G A C T G A C G T
A C G T A C T G C G T A C G T A A G T C C T G A A G T C A C G T A C G T A C G T