Information for 3-TTGTCATC (Motif 35)

A C G T A C G T A C T G A C G T A G T C C G T A A G C T A G T C
Reverse Opposite:
A C T G C T G A A C G T A C T G C G T A G T A C C G T A C G T A
p-value:1e-3
log p-value:-7.157e+00
Information Content per bp:1.922
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif80.00%
Number of Background Sequences with motif9728.5
Percentage of Background Sequences with motif27.21%
Average Position of motif in Targets439.3 +/- 275.3bp
Average Position of motif in Background518.6 +/- 340.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

skn-1/MA0547.1/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--TTGTCATC-----
AATTGTCATCATTTT
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G C T A G T C A C G T A C G T A C G T A C G T A C G T
G C T A G C T A C G A T G C A T C T A G A C G T A G T C C G T A C A G T A T G C C T G A G C A T G A C T G A C T A G C T

unc-62/MA0918.1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TTGTCATC-
GAGCTGTCATTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G C T A G T C A C G T
A C T G C G T A T A C G G T A C A C G T A C T G A C G T G T A C C G T A A G C T A C G T A C G T

elt-3/MA0542.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTGTCATC
TCTTATCA--
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G C T A G T C
A G C T A G T C A C G T A C G T C G T A A C G T A G T C C G T A A C G T A C G T

elt-6/MA1439.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTGTCATC
NTTATCAN-
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G C T A G T C
A T G C G C A T C G A T C T G A C G A T G A T C C G T A A T C G A C G T

ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTGTCATC
TCTTATCAWT
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G C T A G T C
G A C T A T G C G C A T G A C T C T G A A C G T A G T C C G T A G C A T G C A T

PQM-1(?)/cElegans-L3-ChIP-Seq(modEncode)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTGTCATC
TCTTATCAGT
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G C T A G T C
A G C T A T G C G A C T C G A T C G T A A C G T A G T C C G T A C T A G G A C T

elt-2/MA1701.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTGTCATC
TTCTTATCAG-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G C T A G T C
G A C T A G C T T G A C A G C T C G A T C G T A G A C T G T A C C G T A T C A G A C G T

pqm-1/MA1703.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTGTCATC-
TCTTATCAGTN
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G C T A G T C A C G T
A G C T T A G C G A C T G C A T C G T A C G A T G T A C C T G A A T C G G A C T C G A T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTGTCATC
ATTGTT---
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G C T A G T C
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTGTCATC---
---TCAGTCTT
 A C G T A C G T A C T G A C G T A G T C C G T A A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T