Information for 24-CAGCCTGTCAAT (Motif 29)

A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C T G
p-value:1e-3
log p-value:-8.182e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets939.0 +/- 0.0bp
Average Position of motif in Background495.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

unc-62/MA0918.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAGCCTGTCAAT-
-GAGCTGTCATTT
 A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T
A C G T A C T G C G T A T A C G G T A C A C G T A C T G A C G T G T A C C G T A A G C T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CAGCCTGTCAAT
---GCTGTG---
 A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T A G T C C G T A C G T A A C G T
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAGCCTGTCAAT
CAGCC-------
 A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T A G T C C G T A C G T A A C G T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CAGCCTGTCAAT
ACTAGCCAATCA--
 A C G T A C G T A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T A G T C C G T A C G T A A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T

ceh-48/MA0921.1/Jaspar

Match Rank:5
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CAGCCTGTCAAT--
-----AATCGATAA
 A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G T A A G C T G T A C C T A G G C T A C G A T G C T A G C T A

POL002.1_INR/Jaspar

Match Rank:6
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-CAGCCTGTCAAT
TCAGTCTT-----
 A C G T A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T A G T C C G T A C G T A A C G T
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

PL0015.1_hlh-2::hlh-14/Jaspar

Match Rank:7
Score:0.45
Offset:-3
Orientation:forward strand
Alignment:---CAGCCTGTCAAT-
TTAACACCTGTCAAAA
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T
A G C T C A G T C T G A T C G A G T A C C G T A A T G C T G A C A C G T A C T G A G C T A G T C T C G A T G C A C G A T G C T A

ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer

Match Rank:8
Score:0.45
Offset:2
Orientation:reverse strand
Alignment:CAGCCTGTCAAT
--TCTTATCAWT
 A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T A G T C C G T A C G T A A C G T
A C G T A C G T G A C T A T G C G C A T G A C T C T G A A C G T A G T C C G T A G C A T G C A T

sma-4/MA0925.1/Jaspar

Match Rank:9
Score:0.45
Offset:1
Orientation:reverse strand
Alignment:CAGCCTGTCAAT
-NNCCAGACANN
 A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T A G T C C G T A C G T A A C G T
A C G T A C T G A G C T G T A C A G T C C G T A A C T G C G T A G T A C C G T A A G T C A C G T

PQM-1(?)/cElegans-L3-ChIP-Seq(modEncode)/Homer

Match Rank:10
Score:0.44
Offset:2
Orientation:reverse strand
Alignment:CAGCCTGTCAAT
--TCTTATCAGT
 A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C G T A G T C C G T A C G T A A C G T
A C G T A C G T A G C T A T G C G A C T C G A T C G T A A C G T A G T C C G T A C T A G G A C T