Information for 20-TCACCATACCTT (Motif 25)

A C G T A G T C C G T A A G T C A G T C C G T A A C G T C G T A A G T C A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C T G A C G T C G T A A C G T A C T G A C T G A C G T A C T G C G T A
p-value:1e-3
log p-value:-8.182e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets297.0 +/- 0.0bp
Average Position of motif in Background399.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCACCATACCTT
-NNACTTACCTN
 A C G T A G T C C G T A A G T C A G T C C G T A A C G T C G T A A G T C A G T C A C G T A C G T
A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

PL0012.1_hlh-2::hlh-8/Jaspar

Match Rank:2
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TCACCATACCTT---
NANACCAGATGTTTNN
 A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C A T G T G C A G C A T C T G A T G A C T G A C C G T A A C T G T C G A A C G T C A T G A C G T A C G T A C G T T C G A G A C T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.47
Offset:2
Orientation:forward strand
Alignment:TCACCATACCTT-
--AAGATATCCTT
 A C G T A G T C C G T A A G T C A G T C C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

POL007.1_BREd/Jaspar

Match Rank:4
Score:0.47
Offset:2
Orientation:reverse strand
Alignment:TCACCATACCTT
--NANANAC---
 A C G T A G T C C G T A A G T C A G T C C G T A A C G T C G T A A G T C A G T C A C G T A C G T
A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T

SA0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.46
Offset:-8
Orientation:forward strand
Alignment:--------TCACCATACCTT
CCTTTACCCTTCTTCACCTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C G T C G T A A G T C A G T C A C G T A C G T
A G T C A G T C G A C T G C A T G C A T G C T A G A T C G A T C A G C T G A C T G C A T G A T C A G C T A G C T G A T C C G T A A G T C G A T C A G C T C G A T

skn-1/MA0547.1/Jaspar

Match Rank:6
Score:0.46
Offset:-5
Orientation:reverse strand
Alignment:-----TCACCATACCTT
AATTGTCATCATTTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C G T C G T A A G T C A G T C A C G T A C G T
G C T A G C T A C G A T G C A T C T A G A C G T A G T C C G T A C A G T A T G C C T G A G C A T G A C T G A C T A G C T A C G T A C G T

sma-4/MA0925.1/Jaspar

Match Rank:7
Score:0.44
Offset:1
Orientation:reverse strand
Alignment:TCACCATACCTT
-NNCCAGACANN
 A C G T A G T C C G T A A G T C A G T C C G T A A C G T C G T A A G T C A G T C A C G T A C G T
A C G T A C T G A G C T G T A C A G T C C G T A A C T G C G T A G T A C C G T A A G T C A C G T

POL002.1_INR/Jaspar

Match Rank:8
Score:0.44
Offset:0
Orientation:forward strand
Alignment:TCACCATACCTT
TCAGTCTT----
 A C G T A G T C C G T A A G T C A G T C C G T A A C G T C G T A A G T C A G T C A C G T A C G T
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.43
Offset:1
Orientation:reverse strand
Alignment:TCACCATACCTT
-NNACTTGCCTT
 A C G T A G T C C G T A A G T C A G T C C G T A A C G T C G T A A G T C A G T C A C G T A C G T
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PL0005.1_hlh-30/Jaspar

Match Rank:10
Score:0.43
Offset:-4
Orientation:forward strand
Alignment:----TCACCATACCTT-
AGAATCACGTGACAATT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T
G C T A A T C G C G T A C T G A G A C T A G T C C G T A A G T C C T A G C G A T C T A G C T G A A G T C G C T A G C T A C G A T A G C T