Information for 17-CGCCCGCTTGCG (Motif 22)

A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A C G T A A C T G A G T C A C T G A C T G A C T G A G T C A C T G
p-value:1e-3
log p-value:-8.182e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets695.0 +/- 0.0bp
Average Position of motif in Background273.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer

Match Rank:1
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CGCCCGCTTGCG
TRGAGCGCRYTTGCA
 A C G T A C G T A C G T A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C T G A G T C A C T G
G A C T T C A G T C A G T C G A A C T G A G T C C T A G G A T C T C A G A G C T G C A T G A C T C A T G G T A C C G T A

LIN-15B(Zf)/cElegans-L3-LIN15B-ChIP-Seq(modEncode)/Homer

Match Rank:2
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------CGCCCGCTTGCG--
CARTGGAGCGCRYTTGCATT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C T G A G T C A C T G A C G T A C G T
A G T C T C G A C T G A G A C T T C A G T C A G T C G A A C T G A G T C C T A G G A T C T C A G A G T C G C A T G A C T C A T G G A T C C G T A A G C T G A C T

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGCCCGCTTGCG
-GCGCGCTA---
 A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C T G A G T C A C T G
A C G T T C A G A G T C A C T G A G T C C A T G G A T C G A C T G C T A A C G T A C G T A C G T

snpc-4/MA0544.1/Jaspar

Match Rank:4
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CGCCCGCTTGCG
GTGTCGGCCGCT----
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C T G A G T C A C T G
C T A G A G C T A C T G G A C T G T A C A C T G C A T G A G T C A G T C C T A G A G T C G A C T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.49
Offset:-6
Orientation:reverse strand
Alignment:------CGCCCGCTTGCG
NAGCCCCGCCCCCN----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C T G A G T C A C T G
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----CGCCCGCTTGCG
AGCGCGCC--------
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C T G A G T C A C T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CGCCCGCTTGCG
----NGCTN---
 A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C T G A G T C A C T G
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:CGCCCGCTTGCG--
---NNACTTGCCTT
 A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C T G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:9
Score:0.46
Offset:6
Orientation:reverse strand
Alignment:CGCCCGCTTGCG--
------CTTCCGGT
 A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C T G A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T

GEI-11(Myb?)/cElegans-L4-GEI11-ChIP-Seq(modEncode)/Homer

Match Rank:10
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-CGCCCGCTTGCG--
CCGACAYYTYACGGG
 A C G T A G T C A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C T G A G T C A C T G A C G T A C G T
T G A C T A G C A C T G C G T A G A T C C T G A G A T C G A T C G A C T G A T C T C G A A G T C C T A G C T A G C A T G