Information for 4-CTCAGCCGTA (Motif 11)

A G T C A C G T A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C T G A C T G A G T C A C G T A C T G C G T A A C T G
p-value:1e-3
log p-value:-8.182e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets710.0 +/- 0.0bp
Average Position of motif in Background687.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTCAGCCGTA
--CAGCC---
 A G T C A C G T A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTCAGCCGTA
-TCAGTCTT-
 A G T C A C G T A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T

PL0001.1_hlh-11/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTCAGCCGTA--
TCTGATCAGCTGATCG
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A A C G T A C G T
C G A T G A C T G A C T C T A G T C G A G C A T G T A C C G T A A T C G T A G C G A C T A C T G C G T A A C G T T A G C C A T G

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTCAGCCGTA
CACAGN----
 A G T C A C G T A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

hlh-1/MA0545.1/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTCAGCCGTA-
GNCAGCTGTTN
 A G T C A C G T A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A A C G T
T C A G G C T A A G T C C T G A C T A G A G T C A C G T A C T G A G C T A G C T A T G C

PL0013.1_hlh-2::hlh-15/Jaspar

Match Rank:6
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----CTCAGCCGTA--
AGGGCCCAGCTGNTNN
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A A C G T A C G T
T G C A A C T G C A T G T A C G G T A C T A G C T G A C C G T A A T C G T A G C C G A T C A T G A T C G A C G T A G T C G A T C

fos-1/MA1448.1/Jaspar

Match Rank:7
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CTCAGCCGTA
TGACTCA------
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A
A C G T A C T G C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PL0019.1_hlh-1/Jaspar

Match Rank:8
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----CTCAGCCGTA--
NNNCGACAGCTGTCNN
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A A C G T A C G T
A G T C A G T C G C A T A G T C T C A G C G T A T A G C C T G A T A C G A T G C A G C T A C T G G A C T A G T C A T G C G T C A

PL0006.1_hlh-2::lin-32/Jaspar

Match Rank:9
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CTCAGCCGTA---
AAGAACAGCTGTTCTC
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A A C G T A C G T A C G T
G T A C T G C A C T A G T G C A T G C A G T A C C T G A A C T G T G A C A G C T A C T G A C G T A G C T G T A C G A C T T A G C

PL0003.1_hlh-2::cnd-1/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CTCAGCCGTA---
AGGAACAGCTGTCTAA
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A A C G T A C G T A C G T
G T C A A T C G C A T G G T C A T G C A G T A C C G T A A C T G T G A C C G A T C A T G A C G T A G T C G A C T G C T A C G T A