Information for 3-ACGGGACTCG (Motif 10)

C G T A A G T C A C T G A C T G A C T G C G T A A G T C A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C T G A C G T A G T C A G T C A G T C A C T G A C G T
p-value:1e-3
log p-value:-8.182e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets260.0 +/- 0.0bp
Average Position of motif in Background185.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PL0004.1_hlh-27/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACGGGACTCG-----
NNGGGACACGCGCNT
 C G T A A G T C A C T G A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G T A C C G A T T C A G T C A G C T A G G T C A A G T C C G T A A G T C C T A G A G T C A C T G A G T C T G C A G A C T

PL0018.1_hlh-25/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACGGGACTCG------
NNGGGACACGCGCCNN
 C G T A A G T C A C T G A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G A T C T A G C T A G C T A G G T C A A G T C C G T A A G T C C T A G G A T C A C T G A G T C T G A C A G C T A G C T

hlh-30/MA1449.1/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----ACGGGACTCG
AATCACGTGATT--
 A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C T G A C T G C G T A A G T C A C G T A G T C A C T G
C G T A C T G A G A C T A T G C G C T A A G T C T C A G C G A T A T C G C T G A G A C T G C A T A C G T A C G T

PL0005.1_hlh-30/Jaspar

Match Rank:4
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------ACGGGACTCG-
AGAATCACGTGACAATT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C G T
G C T A A T C G C G T A C T G A G A C T A G T C C G T A A G T C C T A G C G A T C T A G C T G A A G T C G C T A G C T A C G A T A G C T

fos-1/MA1448.1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:ACGGGACTCG
---TGACTCA
 C G T A A G T C A C T G A C T G A C T G C G T A A G T C A C G T A G T C A C T G
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A C G T A G T C C G T A

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--ACGGGACTCG
GGGCGGGACC--
 A C G T A C G T C G T A A G T C A C T G A C T G A C T G C G T A A G T C A C G T A G T C A C T G
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

PL0009.1_hlh-26/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:ACGGGACTCG-------
NNNNGACACGTGCCNTN
 C G T A A G T C A C T G A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A A C G T C G A T C T A G C T A G T C G A G T A C C T G A A G T C C T A G G A C T C T A G A G T C G T A C C G T A G A C T G T C A

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.46
Offset:0
Orientation:forward strand
Alignment:ACGGGACTCG
ACCGGAAG--
 C G T A A G T C A C T G A C T G A C T G C G T A A G T C A C G T A G T C A C T G
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T

PL0016.1_ref-1/Jaspar

Match Rank:9
Score:0.45
Offset:-6
Orientation:reverse strand
Alignment:------ACGGGACTCG-
TNNGGCACGTGCCNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C G T
G C A T G C T A C G T A C A T G T C A G A G T C T C G A A G T C C T A G A G C T A C T G A G T C G A T C C G A T C G A T A C T G G C T A

che-1/MA0260.1/Jaspar

Match Rank:10
Score:0.42
Offset:3
Orientation:reverse strand
Alignment:ACGGGACTCG
---GGTTTC-
 C G T A A G T C A C T G A C T G A C T G C G T A A G T C A C G T A G T C A C T G
A C G T A C G T A C G T A T C G A C T G A G C T A C G T A C G T A G T C A C G T