Information for 1-TCAGAATGCATT (Motif 1)

C G A T A G T C C T G A A C T G G T C A C G T A A C G T A C T G A G T C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A G T C A G C T A C T G C G T A
p-value:1e-7
log p-value:-1.800e+01
Information Content per bp:1.919
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif30.00%
Number of Background Sequences with motif16.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets570.3 +/- 274.5bp
Average Position of motif in Background501.7 +/- 267.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

unc-86/MA0926.1/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:TCAGAATGCATT-
-----ATGCATAT
 C G A T A G T C C T G A A C T G G T C A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G G T A C G T C A A C G T C G T A G A C T

POL002.1_INR/Jaspar

Match Rank:2
Score:0.45
Offset:1
Orientation:reverse strand
Alignment:TCAGAATGCATT
-NNNANTGA---
 C G A T A G T C C T G A A C T G G T C A C G T A A C G T A C T G A G T C C G T A A C G T A C G T
A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T

unc-30/MA1443.1/Jaspar

Match Rank:3
Score:0.45
Offset:6
Orientation:reverse strand
Alignment:TCAGAATGCATT--
------NGGATTAN
 C G A T A G T C C T G A A C T G G T C A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G A C T G C G T A A C G T A C G T C G T A C G T A

LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer

Match Rank:4
Score:0.44
Offset:4
Orientation:reverse strand
Alignment:TCAGAATGCATT--
----CATYAATCAT
 C G A T A G T C C T G A A C T G G T C A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C G T A C G A T G A T C G C T A C T G A A C G T G A T C C G T A G C A T

mab-5/MA1442.1/Jaspar

Match Rank:5
Score:0.44
Offset:5
Orientation:forward strand
Alignment:TCAGAATGCATT-
-----ATTAATTA
 C G A T A G T C C T G A A C T G G T C A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G A C T G A C T C G T A C G T A C G A T C G A T C T G A

CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer

Match Rank:6
Score:0.43
Offset:2
Orientation:forward strand
Alignment:TCAGAATGCATT--
--AAATTSAATTTN
 C G A T A G T C C T G A A C T G G T C A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C T G A C G T A A G C T A G C T A T C G T C G A C T G A A C G T G A C T C G A T A C T G

ceh-28/MA1445.1/Jaspar

Match Rank:7
Score:0.43
Offset:3
Orientation:forward strand
Alignment:TCAGAATGCATT-
---AAATCGATTT
 C G A T A G T C C T G A A C T G G T C A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A T C G A A G C T G T A C A C T G C T G A A G C T G C A T C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.42
Offset:-1
Orientation:reverse strand
Alignment:-TCAGAATGCATT
CACAGN-------
 A C G T C G A T A G T C C T G A A C T G G T C A C G T A A C G T A C T G A G T C C G T A A C G T A C G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

lin-14/MA0261.1/Jaspar

Match Rank:9
Score:0.42
Offset:3
Orientation:forward strand
Alignment:TCAGAATGCATT
---GAACAC---
 C G A T A G T C C T G A A C T G G T C A C G T A A C G T A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C T G C G T A C G T A A G T C C T G A A G T C A C G T A C G T A C G T

MA0261.1_lin-14/Jaspar

Match Rank:10
Score:0.42
Offset:3
Orientation:forward strand
Alignment:TCAGAATGCATT
---GAACAC---
 C G A T A G T C C T G A A C T G G T C A C G T A A C G T A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C T G C G T A C G T A A G T C C T G A A G T C A C G T A C G T A C G T