Information for 6-TGTTTTCATCGT (Motif 9)

A C G T A T C G A C G T A C G T A C G T A C G T A T G C C G T A C A G T A G T C T A C G A G C T
Reverse Opposite:
C T G A A T G C C T A G G T C A A C G T T A C G G T C A C G T A C G T A C G T A T A G C C G T A
p-value:1e-12
log p-value:-2.853e+01
Information Content per bp:1.859
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif4.72%
Number of Background Sequences with motif232.3
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets546.4 +/- 284.9bp
Average Position of motif in Background519.5 +/- 352.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

fkh-9/MA1440.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTTCATCGT
TTGTTTTT-----
 A C G T A C G T A T C G A C G T A C G T A C G T A C G T A T G C C G T A C A G T A G T C T A C G A G C T
C G A T C G A T C T A G A C G T A C G T C G A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

daf-16/MA1446.1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGTTTTCATCGT
NNGTGTTTACNN---
 A C G T A C G T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A T G C C G T A C A G T A G T C T A C G A G C T
C G A T G A C T C A T G G A C T C T A G C G A T C A G T A C G T C T G A A G T C G C T A G C A T A C G T A C G T A C G T

PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGTTTTCATCGT
KTGTTTGC-----
 A C G T A C G T A T C G A C G T A C G T A C G T A C G T A T G C C G T A C A G T A G T C T A C G A G C T
C A T G A C G T C T A G A C G T C A G T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGTTTTCATCGT
TGTTTATTT---
 A C G T A T C G A C G T A C G T A C G T A C G T A T G C C G T A C A G T A G T C T A C G A G C T
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T

pha-4/MA0546.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGTTTTCATCGT
TGTTTACTTT--
 A C G T A T C G A C G T A C G T A C G T A C G T A T G C C G T A C A G T A G T C T A C G A G C T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T G A C T C G A T A C G T A C G T

skn-1/MA0547.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGTTTTCATCGT---
AATTGTCATCATTTT
 A C G T A T C G A C G T A C G T A C G T A C G T A T G C C G T A C A G T A G T C T A C G A G C T A C G T A C G T A C G T
G C T A G C T A C G A T G C A T C T A G A C G T A G T C C G T A C A G T A T G C C T G A G C A T G A C T G A C T A G C T

elt-3/MA0542.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGTTTTCATCGT
TCTTATCA----
 A C G T A T C G A C G T A C G T A C G T A C G T A T G C C G T A C A G T A G T C T A C G A G C T
A G C T A G T C A C G T A C G T C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T

fkh-2/MA0920.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTTCATCGT
TTGTTTAC-----
 A C G T A C G T A T C G A C G T A C G T A C G T A C G T A T G C C G T A C A G T A G T C T A C G A G C T
C A G T A C G T C A T G A C G T C G A T A C G T C G T A G A T C A C G T A C G T A C G T A C G T A C G T

ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGTTTTCATCGT
TCTTATCAWT--
 A C G T A T C G A C G T A C G T A C G T A C G T A T G C C G T A C A G T A G T C T A C G A G C T
G A C T A T G C G C A T G A C T C T G A A C G T A G T C C G T A G C A T G C A T A C G T A C G T

PQM-1(?)/cElegans-L3-ChIP-Seq(modEncode)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGTTTTCATCGT
TCTTATCAGT--
 A C G T A T C G A C G T A C G T A C G T A C G T A T G C C G T A C A G T A G T C T A C G A G C T
A G C T A T G C G A C T C G A T C G T A A C G T A G T C C G T A C T A G G A C T A C G T A C G T