Information for 6-CAGKCCGCGG (Motif 8)

T A G C G T C A T C A G A C G T G T A C T A G C C T A G G A T C A T C G C A T G
Reverse Opposite:
G T A C T A G C C T A G A G T C A T C G C A T G G T C A A G T C A C G T A T C G
p-value:1e-12
log p-value:-2.881e+01
Information Content per bp:1.695
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif5.58%
Number of Background Sequences with motif340.2
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets347.2 +/- 238.0bp
Average Position of motif in Background479.4 +/- 323.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GEI-11(Myb?)/cElegans-L4-GEI11-ChIP-Seq(modEncode)/Homer

Match Rank:1
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CAGKCCGCGG-
CCGACAYYTYACGGG
 A C G T A C G T A C G T A C G T T A G C G T C A T C A G A C G T G T A C T A G C C T A G G A T C A T C G C A T G A C G T
T G A C T A G C A C T G C G T A G A T C C T G A G A T C G A T C G A C T G A T C T C G A A G T C C T A G C T A G C A T G

efl-1/MA0541.1/Jaspar

Match Rank:2
Score:0.47
Offset:1
Orientation:forward strand
Alignment:CAGKCCGCGG------
-CGCGCGCGCGAAATT
 T A G C G T C A T C A G A C G T G T A C T A G C C T A G G A T C A T C G C A T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T A G G A T C C A T G T A G C T C A G T G A C A C T G A T G C T A C G G T C A T C G A C G T A G C A T A G C T

POL002.1_INR/Jaspar

Match Rank:3
Score:0.44
Offset:-1
Orientation:forward strand
Alignment:-CAGKCCGCGG
TCAGTCTT---
 A C G T T A G C G T C A T C A G A C G T G T A C T A G C C T A G G A T C A T C G C A T G
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T

PL0001.1_hlh-11/Jaspar

Match Rank:4
Score:0.43
Offset:-2
Orientation:forward strand
Alignment:--CAGKCCGCGG----
TCTGATCAGCTGATCG
 A C G T A C G T T A G C G T C A T C A G A C G T G T A C T A G C C T A G G A T C A T C G C A T G A C G T A C G T A C G T A C G T
C G A T G A C T G A C T C T A G T C G A G C A T G T A C C G T A A T C G T A G C G A C T A C T G C G T A A C G T T A G C C A T G

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:5
Score:0.43
Offset:4
Orientation:reverse strand
Alignment:CAGKCCGCGG--
----GCGCGCTA
 T A G C G T C A T C A G A C G T G T A C T A G C C T A G G A T C A T C G C A T G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A G T C A C T G A G T C C A T G G A T C G A C T G C T A

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.43
Offset:4
Orientation:forward strand
Alignment:CAGKCCGCGG----
----GGGCGGGACC
 T A G C G T C A T C A G A C G T G T A C T A G C C T A G G A T C A T C G C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.43
Offset:-2
Orientation:forward strand
Alignment:--CAGKCCGCGG
AGCGCGCC----
 A C G T A C G T T A G C G T C A T C A G A C G T G T A C T A G C C T A G G A T C A T C G C A T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

PL0007.1_mxl-3/Jaspar

Match Rank:8
Score:0.42
Offset:0
Orientation:reverse strand
Alignment:CAGKCCGCGG------
NNNACCACGTGGTNNN
 T A G C G T C A T C A G A C G T G T A C T A G C C T A G G A T C A T C G C A T G A C G T A C G T A C G T A C G T A C G T A C G T
G A T C C A T G T C A G C T G A T G A C G T A C C G T A A G T C C T A G G A C T A C T G A C T G A G C T G T A C G A T C T C A G

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.42
Offset:1
Orientation:forward strand
Alignment:CAGKCCGCGG-----
-AGGGGGCGGGGCTG
 T A G C G T C A T C A G A C G T G T A C T A G C C T A G G A T C A T C G C A T G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

snpc-4/MA0544.1/Jaspar

Match Rank:10
Score:0.42
Offset:2
Orientation:reverse strand
Alignment:CAGKCCGCGG----
--AGCGGCCGACAC
 T A G C G T C A T C A G A C G T G T A C T A G C C T A G G A T C A T C G C A T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G G A T C T C A G T C A G G T A C T A G C C A T G C G T A A G T C C T G A G A T C