Information for 5-CGCTCTRKTG (Motif 7)

A G T C C A T G G T A C A G C T A G T C A G C T C T G A A C G T A G C T A C T G
Reverse Opposite:
A G T C C T G A T G C A G A C T C T G A C T A G C T G A A C T G G T A C A C T G
p-value:1e-12
log p-value:-2.906e+01
Information Content per bp:1.748
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif10.94%
Number of Background Sequences with motif1302.4
Percentage of Background Sequences with motif3.29%
Average Position of motif in Targets636.1 +/- 287.1bp
Average Position of motif in Background551.3 +/- 333.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN-15B(Zf)/cElegans-L3-LIN15B-ChIP-Seq(modEncode)/Homer

Match Rank:1
Score:0.70
Offset:-10
Orientation:reverse strand
Alignment:----------CGCTCTRKTG
AATGCAARYGCGCTCCAYTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C A T G G T A C A G C T A G T C A G C T C T G A A C G T A G C T A C T G
C G T A T C G A G C A T C T A G G T A C C G T A C G T A T C A G A G T C C T A G A G T C A C T G A G T C A G C T A G T C A G T C C T G A G A C T A G C T C T A G

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGCTCTRKTG
GCGCGCTA---
 A C G T A G T C C A T G G T A C A G C T A G T C A G C T C T G A A C G T A G C T A C T G
T C A G A G T C A C T G A G T C C A T G G A T C G A C T G C T A A C G T A C G T A C G T

EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer

Match Rank:3
Score:0.58
Offset:-8
Orientation:forward strand
Alignment:--------CGCTCTRKTG
TGCAARYGCGCTCYA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C A T G G T A C A G C T A G T C A G C T C T G A A C G T A G C T A C T G
G C A T C A T G G T A C C T G A C G T A C T G A A G T C C T A G A G T C A C T G A G T C A G C T A G T C A G T C C T G A A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGCTCTRKTG
NGCTN-----
 A G T C C A T G G T A C A G C T A G T C A G C T C T G A A C G T A G C T A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CGCTCTRKTG
-GCTCCG---
 A G T C C A T G G T A C A G C T A G T C A G C T C T G A A C G T A G C T A C T G
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

ceh-22/MA0264.1/Jaspar

Match Rank:6
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:CGCTCTRKTG--
-TTTCAAGTGGN
 A G T C C A T G G T A C A G C T A G T C A G C T C T G A A C G T A G C T A C T G A C G T A C G T
A C G T A C G T A C G T C G A T A T G C C T G A C G T A A C T G C G A T C T A G A T C G G A C T

MA0264.1_ceh-22/Jaspar

Match Rank:7
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:CGCTCTRKTG--
-TTTCAAGTGGN
 A G T C C A T G G T A C A G C T A G T C A G C T C T G A A C G T A G C T A C T G A C G T A C G T
A C G T A C G T A C G T C G A T A T G C C T G A C G T A A C T G C G A T C T A G A T C G G A C T

POL001.1_MTE/Jaspar

Match Rank:8
Score:0.46
Offset:-5
Orientation:reverse strand
Alignment:-----CGCTCTRKTG----
NCGACCGCTCCGCTCGAAA
 A C G T A C G T A C G T A C G T A C G T A G T C C A T G G T A C A G C T A G T C A G C T C T G A A C G T A G C T A C T G A C G T A C G T A C G T A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

PL0001.1_hlh-11/Jaspar

Match Rank:9
Score:0.45
Offset:0
Orientation:reverse strand
Alignment:CGCTCTRKTG------
NGATCAGCTGATCNNN
 A G T C C A T G G T A C A G C T A G T C A G C T C T G A A C G T A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A T C G T C G A G C A T G T A C C T G A A T C G T A G C C G A T A C T G C G T A A G C T G A T C C T G A C T A G G C T A

POL002.1_INR/Jaspar

Match Rank:10
Score:0.44
Offset:3
Orientation:reverse strand
Alignment:CGCTCTRKTG-
---NNNANTGA
 A G T C C A T G G T A C A G C T A G T C A G C T C T G A A C G T A G C T A C T G A C G T
A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A