Information for 4-TTCTTCGCAG (Motif 5)

A G C T A G C T T A G C C G A T C G A T T G A C C T A G A G T C C G T A C T A G
Reverse Opposite:
A G T C G C A T T C A G G A T C A C T G C G T A G C T A A C T G C T G A C T G A
p-value:1e-13
log p-value:-3.127e+01
Information Content per bp:1.841
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif10.52%
Number of Background Sequences with motif1139.1
Percentage of Background Sequences with motif2.88%
Average Position of motif in Targets493.9 +/- 282.2bp
Average Position of motif in Background492.8 +/- 339.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTCTTCGCAG
-GCTTCC---
 A G C T A G C T T A G C C G A T C G A T T G A C C T A G A G T C C G T A C T A G
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

elt-2/MA1701.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTCTTCGCAG
TTCTTATCAG
 A G C T A G C T T A G C C G A T C G A T T G A C C T A G A G T C C G T A C T A G
G A C T A G C T T G A C A G C T C G A T C G T A G A C T G T A C C G T A T C A G

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------TTCTTCGCAG---
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C T T A G C C G A T C G A T T G A C C T A G A G T C C G T A C T A G A C G T A C G T A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------TTCTTCGCAG---
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C T T A G C C G A T C G A T T G A C C T A G A G T C C G T A C T A G A C G T A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

elt-3/MA0542.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTCTTCGCAG
-TCTTATCA-
 A G C T A G C T T A G C C G A T C G A T T G A C C T A G A G T C C G T A C T A G
A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C C G T A A C G T

PQM-1(?)/cElegans-L3-ChIP-Seq(modEncode)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTCTTCGCAG-
-TCTTATCAGT
 A G C T A G C T T A G C C G A T C G A T T G A C C T A G A G T C C G T A C T A G A C G T
A C G T A G C T A T G C G A C T C G A T C G T A A C G T A G T C C G T A C T A G G A C T

pqm-1/MA1703.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTCTTCGCAG--
-TCTTATCAGTN
 A G C T A G C T T A G C C G A T C G A T T G A C C T A G A G T C C G T A C T A G A C G T A C G T
A C G T A G C T T A G C G A C T G C A T C G T A C G A T G T A C C T G A A T C G G A C T C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TTCTTCGCAG-
-----CACAGN
 A G C T A G C T T A G C C G A T C G A T T G A C C T A G A G T C C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TTCTTCGCAG-
-TCTTATCAWT
 A G C T A G C T T A G C C G A T C G A T T G A C C T A G A G T C C G T A C T A G A C G T
A C G T G A C T A T G C G C A T G A C T C T G A A C G T A G T C C G T A G C A T G C A T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TTCTTCGCAG
ATTGTT-----
 A C G T A G C T A G C T T A G C C G A T C G A T T G A C C T A G A G T C C G T A C T A G
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T