Information for 23-TTGGCACTGTGC (Motif 33)

A G C T A C G T A C T G A C T G A G T C C T G A G T A C C A G T A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A G T A C G T C A A C T G A G C T A C T G A G T C A G T C C G T A C T G A
p-value:1e-5
log p-value:-1.293e+01
Information Content per bp:1.879
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.79%
Number of Background Sequences with motif209.0
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets439.7 +/- 238.3bp
Average Position of motif in Background438.3 +/- 310.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTGGCACTGTGC
--GGCGCGCT--
 A G C T A C G T A C T G A C T G A G T C C T G A G T A C C A G T A C T G A C G T A C T G A G T C
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TTGGCACTGTGC
TGATTGGCTANN---
 A C G T A C G T A C G T A G C T A C G T A C T G A C T G A G T C C T G A G T A C C A G T A C T G A C G T A C T G A G T C
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.48
Offset:5
Orientation:forward strand
Alignment:TTGGCACTGTGC
-----GCTGTG-
 A G C T A C G T A C T G A C T G A G T C C T G A G T A C C A G T A C T G A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

dpy-27/MA0540.1/Jaspar

Match Rank:4
Score:0.47
Offset:1
Orientation:forward strand
Alignment:TTGGCACTGTGC-----
-TCTCCCTGCGCGATAA
 A G C T A C G T A C T G A C T G A G T C C T G A G T A C C A G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A T C G C A G T G A T C A G T C A G T C A C G T A C T G A G T C A C T G A G T C A C T G C G T A C G A T C G T A T C G A

efl-1/MA0541.1/Jaspar

Match Rank:5
Score:0.46
Offset:-3
Orientation:reverse strand
Alignment:---TTGGCACTGTGC
AATTTCGCGCGNNNN
 A C G T A C G T A C G T A G C T A C G T A C T G A C T G A G T C C T G A G T A C C A G T A C T G A C G T A C T G A G T C
T C G A C G T A G C A T A G C T C A G T A T G C A T C G A G T C A C T G A G T C A T C G G T A C C T A G G A T C C A T G

pha-4/MA0546.1/Jaspar

Match Rank:6
Score:0.43
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCACTGTGC
TGTTTACTTT----
 A C G T A C G T A G C T A C G T A C T G A C T G A G T C C T G A G T A C C A G T A C T G A C G T A C T G A G T C
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T G A C T C G A T A C G T A C G T A C G T A C G T

ceh-10::ttx-3/MA0263.1/Jaspar

Match Rank:7
Score:0.43
Offset:-1
Orientation:forward strand
Alignment:-TTGGCACTGTGC-
ATTGGCTTCGTTAA
 A C G T A G C T A C G T A C T G A C T G A G T C C T G A G T A C C A G T A C T G A C G T A C T G A G T C A C G T
C T G A A C G T C G A T C T A G A C T G G A T C G A C T G A C T G T A C T C A G A C G T A G C T G C T A C T G A

MA0263.1_ttx-3::ceh-10/Jaspar

Match Rank:8
Score:0.43
Offset:-1
Orientation:forward strand
Alignment:-TTGGCACTGTGC-
ATTGGCTTCGTTAA
 A C G T A G C T A C G T A C T G A C T G A G T C C T G A G T A C C A G T A C T G A C G T A C T G A G T C A C G T
C T G A A C G T C G A T C T A G A C T G G A T C G A C T G A C T G T A C T C A G A C G T A G C T G C T A C T G A

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.40
Offset:2
Orientation:forward strand
Alignment:TTGGCACTGTGC
--GGGGATTTCC
 A G C T A C G T A C T G A C T G A G T C C T G A G T A C C A G T A C T G A C G T A C T G A G T C
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

unc-62/MA0918.1/Jaspar

Match Rank:10
Score:0.39
Offset:-3
Orientation:forward strand
Alignment:---TTGGCACTGTGC
GAGCTGTCATTT---
 A C G T A C G T A C G T A G C T A C G T A C T G A C T G A G T C C T G A G T A C C A G T A C T G A C G T A C T G A G T C
A C T G C G T A T A C G G T A C A C G T A C T G A C G T G T A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T