Information for 20-TTAAACGGGS (Motif 30)

C A G T C A G T T C G A C G T A G C T A A G T C C A T G C A T G C T A G A T C G
Reverse Opposite:
T A G C G A T C G T A C G T A C T C A G C G A T G C A T A G C T G T C A G T C A
p-value:1e-6
log p-value:-1.393e+01
Information Content per bp:1.588
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.58%
Number of Background Sequences with motif159.4
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets544.2 +/- 289.0bp
Average Position of motif in Background537.4 +/- 300.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PL0014.1_mxl-1::mdl-1/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTAAACGGGS----
NNTNGCACGTGCTNNA
 A C G T A C G T C A G T C A G T T C G A C G T A G C T A A G T C C A T G C A T G C T A G A T C G A C G T A C G T A C G T A C G T
T A C G C G A T A C G T T G C A A T C G A G T C C T G A A G T C C T A G C G A T A C T G A T C G G A C T G C T A G C A T C T G A

EGL-5(Homeobox)/cElegans-L3-EGL5-ChIP-Seq(modEncode)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTAAACGGGS
ATTTAATGGG-
 A C G T C A G T C A G T T C G A C G T A G C T A A G T C C A T G C A T G C T A G A T C G
C T G A C G A T C A G T C A G T C G T A C G T A A C G T C A T G C T A G A T C G A C G T

PL0016.1_ref-1/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTAAACGGGS-----
TNNGGCACGTGCCNTNN
 A C G T A C G T C A G T C A G T T C G A C G T A G C T A A G T C C A T G C A T G C T A G A T C G A C G T A C G T A C G T A C G T A C G T
G C A T G C T A C G T A C A T G T C A G A G T C T C G A A G T C C T A G A G C T A C T G A G T C G A T C C G A T C G A T A C T G G C T A

PL0009.1_hlh-26/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TTAAACGGGS----
NNNNGACACGTGCCNTN
 A C G T A C G T A C G T C A G T C A G T T C G A C G T A G C T A A G T C C A T G C A T G C T A G A T C G A C G T A C G T A C G T A C G T
G C T A A C G T C G A T C T A G C T A G T C G A G T A C C T G A A G T C C T A G G A C T C T A G A G T C G T A C C G T A G A C T G T C A

PL0007.1_mxl-3/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TTAAACGGGS----
CGGACCACGTGGTCCG
 A C G T A C G T C A G T C A G T T C G A C G T A G C T A A G T C C A T G C A T G C T A G A T C G A C G T A C G T A C G T A C G T
A G T C C T A G C A T G T C G A T G A C G T A C C G T A A G T C C T A G G A C T A C T G A C T G G A C T A G T C G T A C C T A G

lin-14/MA0261.1/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TTAAACGGGS
--GAACAC--
 C A G T C A G T T C G A C G T A G C T A A G T C C A T G C A T G C T A G A T C G
A C G T A C G T A C T G C G T A C G T A A G T C C T G A A G T C A C G T A C G T

MA0261.1_lin-14/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TTAAACGGGS
--GAACAC--
 C A G T C A G T T C G A C G T A G C T A A G T C C A T G C A T G C T A G A T C G
A C G T A C G T A C T G C G T A C G T A A G T C C T G A A G T C A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:8
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:TTAAACGGGS-
---AACCGANA
 C A G T C A G T T C G A C G T A G C T A A G T C C A T G C A T G C T A G A T C G A C G T
A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.47
Offset:-9
Orientation:reverse strand
Alignment:---------TTAAACGGGS
NNNNNNCTTTTATAN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A G T T C G A C G T A G C T A A G T C C A T G C A T G C T A G A T C G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:10
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:TTAAACGGGS-
---CACGTGNT
 C A G T C A G T T C G A C G T A G C T A A G T C C A T G C A T G C T A G A T C G A C G T
A C G T A C G T A C G T G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T