Information for 2-TTTCGTTCTC (Motif 3)

G A C T G C A T G C A T T A G C A C T G A C G T G C A T A T G C A C G T T A G C
Reverse Opposite:
A T C G T G C A T A C G C G T A G T C A T G A C A T C G C G T A C G T A C T G A
p-value:1e-13
log p-value:-3.178e+01
Information Content per bp:1.649
Number of Target Sequences with motif226.0
Percentage of Target Sequences with motif48.50%
Number of Background Sequences with motif12413.9
Percentage of Background Sequences with motif31.38%
Average Position of motif in Targets509.2 +/- 283.7bp
Average Position of motif in Background520.4 +/- 338.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

blmp-1/MA0537.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTCGTTCTC
TTTTCNCTTTT
 A C G T G A C T G C A T G C A T T A G C A C T G A C G T G C A T A T G C A C G T T A G C
A G C T G A C T G A C T A C G T A G T C G C T A G A T C A G C T A G C T G A C T A G C T

lin-14/MA0261.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTTCGTTCTC
--GTGTTC--
 G A C T G C A T G C A T T A G C A C T G A C G T G C A T A T G C A C G T T A G C
A C G T A C G T T C A G G A C T A C T G A C G T A C G T A G T C A C G T A C G T

MA0261.1_lin-14/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTTCGTTCTC
--GTGTTC--
 G A C T G C A T G C A T T A G C A C T G A C G T G C A T A T G C A C G T T A G C
A C G T A C G T T C A G G A C T A C T G A C G T A C G T A G T C A C G T A C G T

eor-1/MA0543.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTTCGTTCTC---
TCTCTGCGTCTCTNN
 A C G T A C G T G A C T G C A T G C A T T A G C A C T G A C G T G C A T A T G C A C G T T A G C A C G T A C G T A C G T
G A C T A T G C G A C T A G T C A C G T A T C G G A T C A T C G G A C T G A T C C G A T G A T C A G C T G A T C G A C T

cebp-1/MA1444.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTTCGTTCTC-
ATTTCGTAATAT
 A C G T G A C T G C A T G C A T T A G C A C T G A C G T G C A T A T G C A C G T T A G C A C G T
C T G A C G A T G C A T G A C T G T A C C T A G G A C T G T C A C G T A G A C T C G T A G C A T

che-1/MA0260.1/Jaspar

Match Rank:6
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--TTTCGTTCTC
GGTTTC------
 A C G T A C G T G A C T G C A T G C A T T A G C A C T G A C G T G C A T A T G C A C G T T A G C
A T C G A C T G A G C T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

MA0260.1_che-1/Jaspar

Match Rank:7
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--TTTCGTTCTC
GGTTTC------
 A C G T A C G T G A C T G C A T G C A T T A G C A C T G A C G T G C A T A T G C A C G T T A G C
A T C G A C T G A G C T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:8
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-TTTCGTTCTC
TGTCGGTT---
 A C G T G A C T G C A T G C A T T A G C A C T G A C G T G C A T A T G C A C G T T A G C
C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T A C G T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:9
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-TTTCGTTCTC
CTTCCGGT---
 A C G T G A C T G C A T G C A T T A G C A C T G A C G T G C A T A T G C A C G T T A G C
A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.45
Offset:-4
Orientation:forward strand
Alignment:----TTTCGTTCTC
AAGATATCCTT---
 A C G T A C G T A C G T A C G T G A C T G C A T G C A T T A G C A C T G A C G T G C A T A T G C A C G T T A G C
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T