Information for 21-CGAAGTCCTAAA (Motif 28)

A G T C A T C G C G T A C G T A A C T G A C G T A G T C A G T C A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C A C G T A C G T A T G C A C T G
p-value:1e-7
log p-value:-1.621e+01
Information Content per bp:1.967
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets616.2 +/- 231.5bp
Average Position of motif in Background363.9 +/- 394.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CGAAGTCCTAAA
NGAAGC------
 A G T C A T C G C G T A C G T A A C T G A C G T A G T C A G T C A C G T C G T A C G T A C G T A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

POL005.1_DPE/Jaspar

Match Rank:2
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CGAAGTCCTAAA
-GAAGATGTT--
 A G T C A T C G C G T A C G T A A C T G A C G T A G T C A G T C A C G T C G T A C G T A C G T A
A C G T T C A G G T C A C T G A A T C G G C T A G A C T T A C G G A C T G A C T A C G T A C G T

pal-1/MA0924.1/Jaspar

Match Rank:3
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CGAAGTCCTAAA
----GTAATAAA
 A G T C A T C G C G T A C G T A A C T G A C G T A G T C A G T C A C G T C G T A C G T A C G T A
A C G T A C G T A C G T A C G T C T A G A G C T G T C A C G T A A C G T C G T A C G T A G T C A

zip-8/MA1704.1/Jaspar

Match Rank:4
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:CGAAGTCCTAAA
TGACGTCATNN-
 A G T C A T C G C G T A C G T A A C T G A C G T A G T C A G T C A C G T C G T A C G T A C G T A
G A C T A C T G C T G A A G T C C A T G G A C T G T A C C G T A A G C T G T C A C T G A A C G T

cebp-1/MA1444.1/Jaspar

Match Rank:5
Score:0.45
Offset:1
Orientation:reverse strand
Alignment:CGAAGTCCTAAA-
-NTATTACGAAAT
 A G T C A T C G C G T A C G T A A C T G A C G T A G T C A G T C A C G T C G T A C G T A C G T A A C G T
A C G T C G T A G C A T C T G A G C A T C A G T C T G A G A T C C A T G C T G A C G T A G C T A G A C T

che-1/MA0260.1/Jaspar

Match Rank:6
Score:0.45
Offset:1
Orientation:forward strand
Alignment:CGAAGTCCTAAA
-GAAACC-----
 A G T C A T C G C G T A C G T A A C T G A C G T A G T C A G T C A C G T C G T A C G T A C G T A
A C G T A C T G C G T A C G T A C T G A A G T C A T G C A C G T A C G T A C G T A C G T A C G T

MA0260.1_che-1/Jaspar

Match Rank:7
Score:0.45
Offset:1
Orientation:forward strand
Alignment:CGAAGTCCTAAA
-GAAACC-----
 A G T C A T C G C G T A C G T A A C T G A C G T A G T C A G T C A C G T C G T A C G T A C G T A
A C G T A C T G C G T A C G T A C T G A A G T C A T G C A C G T A C G T A C G T A C G T A C G T

atf-7/MA1438.1/Jaspar

Match Rank:8
Score:0.43
Offset:0
Orientation:reverse strand
Alignment:CGAAGTCCTAAA
TGACGTCATN--
 A G T C A T C G C G T A C G T A A C T G A C G T A G T C A G T C A C G T C G T A C G T A C G T A
A C G T A T C G C T G A A G T C T C A G G C A T A G T C C T G A A G C T C G A T A C G T A C G T

fkh-2/MA0920.1/Jaspar

Match Rank:9
Score:0.41
Offset:7
Orientation:forward strand
Alignment:CGAAGTCCTAAA---
-------GTAAACAA
 A G T C A T C G C G T A C G T A A C T G A C G T A G T C A G T C A C G T C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G A T G T C A C G T A C G T A G T A C C G T A G C T A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.41
Offset:4
Orientation:reverse strand
Alignment:CGAAGTCCTAAA------------
----NNCCTGNAAAAAAAAAAAAA
 A G T C A T C G C G T A C G T A A C T G A C G T A G T C A G T C A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A