Information for 10-TGGACATC (Motif 27)

A C G T A C T G A C T G C G T A A T G C G C T A A G C T A G T C
Reverse Opposite:
A C T G T C G A C G A T A T C G A C G T A G T C A G T C C G T A
p-value:1e-7
log p-value:-1.640e+01
Information Content per bp:1.878
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif15.02%
Number of Background Sequences with motif3028.8
Percentage of Background Sequences with motif7.66%
Average Position of motif in Targets403.2 +/- 255.7bp
Average Position of motif in Background470.3 +/- 315.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

atf-7/MA1438.1/Jaspar

Match Rank:1
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGGACATC---
-TGACGTCATN
 A C G T A C T G A C T G C G T A A T G C G C T A A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A T C G C T G A A G T C T C A G G C A T A G T C C T G A A G C T C G A T

unc-62/MA0918.1/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGGACATC--
NNNTGACAGCTN
 A C G T A C G T A C G T A C T G A C T G C G T A A T G C G C T A A G C T A G T C A C G T A C G T
C G T A C G T A T C G A C G A T A C T G C G T A A G T C C G T A C A T G A T G C A C G T A G T C

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGGACATC--
AAGGATATNTN
 A C G T A C G T A C T G A C T G C G T A A T G C G C T A A G C T A G T C A C G T A C G T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TGGACATC
AGGTCA--
 A C G T A C T G A C T G C G T A A T G C G C T A A G C T A G T C
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TGGACATC-
---ACGTCA
 A C G T A C T G A C T G C G T A A T G C G C T A A G C T A G T C A C G T
A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A

lin-14/MA0261.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TGGACATC
-GAACAC-
 A C G T A C T G A C T G C G T A A T G C G C T A A G C T A G T C
A C G T A C T G C G T A C G T A A G T C C T G A A G T C A C G T

MA0261.1_lin-14/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TGGACATC
-GAACAC-
 A C G T A C T G A C T G C G T A A T G C G C T A A G C T A G T C
A C G T A C T G C G T A C G T A A G T C C T G A A G T C A C G T

PL0019.1_hlh-1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGGACATC--------
TGGACAGCTGTCGAGG
 A C G T A C T G A C T G C G T A A T G C G C T A A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T T A C G T C A G C G T A T A G C C T G A T A C G A T G C A G C T A C T G G C A T A G T C C T A G C G T A T C A G T C A G

PL0004.1_hlh-27/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TGGACATC-----
NNGGGACACGCGCNT
 A C G T A C G T A C G T A C T G A C T G C G T A A T G C G C T A A G C T A G T C A C G T A C G T A C G T A C G T A C G T
G T A C C G A T T C A G T C A G C T A G G T C A A G T C C G T A A G T C C T A G A G T C A C T G A G T C T G C A G A C T

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TGGACATC---
-GGAAATCCCC
 A C G T A C T G A C T G C G T A A T G C G C T A A G C T A G T C A C G T A C G T A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C