Information for 18-CCCGCCCACAGA (Motif 22)

T A G C G T A C G A T C A T C G A G T C G A T C T A G C C G T A T G A C C G T A A C T G C T G A
Reverse Opposite:
G A C T G T A C A C G T A C T G C G A T A C T G C T A G A C T G A T G C C T A G C A T G A T C G
p-value:1e-8
log p-value:-1.992e+01
Information Content per bp:1.748
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif3.65%
Number of Background Sequences with motif213.9
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets496.3 +/- 253.9bp
Average Position of motif in Background482.3 +/- 292.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCCGCCCACAGA
NAGCCCCGCCCCCN--
 A C G T A C G T A C G T A C G T T A G C G T A C G A T C A T C G A G T C G A T C T A G C C G T A T G A C C G T A A C T G C T G A
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCCGCCCACAGA
GGTCCCGCCC-----
 A C G T A C G T A C G T T A G C G T A C G A T C A T C G A G T C G A T C T A G C C G T A T G A C C G T A A C T G C T G A
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CCCGCCCACAGA
------CACAGN
 T A G C G T A C G A T C A T C G A G T C G A T C T A G C C G T A T G A C C G T A A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCCACAGA
AGCGCGCC------
 A C G T A C G T T A G C G T A C G A T C A T C G A G T C G A T C T A G C C G T A T G A C C G T A A C T G C T G A
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

snpc-4/MA0544.1/Jaspar

Match Rank:5
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CCCGCCCACAGA
AGCGGCCGACAC-
 A C G T T A G C G T A C G A T C A T C G A G T C G A T C T A G C C G T A T G A C C G T A A C T G C T G A
C T G A T C A G G A T C T C A G T C A G G T A C T A G C C A T G C G T A A G T C C T G A G A T C A C G T

efl-1/MA0541.1/Jaspar

Match Rank:6
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----CCCGCCCACAGA
AATTTCGCGCGNNNN--
 A C G T A C G T A C G T A C G T A C G T T A G C G T A C G A T C A T C G A G T C G A T C T A G C C G T A T G A C C G T A A C T G C T G A
T C G A C G T A G C A T A G C T C A G T A T G C A T C G A G T C A C T G A G T C A T C G G T A C C T A G G A T C C A T G A C G T A C G T

PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer

Match Rank:7
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:CCCGCCCACAGA
---GCAAACAM-
 T A G C G T A C G A T C A T C G A G T C G A T C T A G C C G T A T G A C C G T A A C T G C T G A
A C G T A C G T A C G T C T A G A G T C C G T A G T C A C G T A A G T C C G T A G T A C A C G T

daf-12/MA0538.1/Jaspar

Match Rank:8
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CCCGCCCACAGA---
NACGCACACACACAC
 T A G C G T A C G A T C A T C G A G T C G A T C T A G C C G T A T G A C C G T A A C T G C T G A A C G T A C G T A C G T
T A G C T G C A G T A C T C A G T A G C C G T A T G A C C T G A A G T C C T G A A G T C C T G A A G T C G C T A A G T C

dpy-27/MA0540.1/Jaspar

Match Rank:9
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCCCACAGA--
TTATCGCGCAGGGANA
 A C G T A C G T T A G C G T A C G A T C A T C G A G T C G A T C T A G C C G T A T G A C C G T A A C T G C T G A A C G T A C G T
A G C T G C A T G C T A C G A T A G T C C T A G A G T C A C T G G T A C C G T A A C T G A C T G C T A G G T C A T A C G T C G A

sma-4/MA0925.1/Jaspar

Match Rank:10
Score:0.45
Offset:3
Orientation:reverse strand
Alignment:CCCGCCCACAGA--
---NNCCAGACANN
 T A G C G T A C G A T C A T C G A G T C G A T C T A G C C G T A T G A C C G T A A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C T G A G C T G T A C A G T C C G T A A C T G C G T A G T A C C G T A A G T C A C G T