Information for 13-AACAAYAACA (Motif 21)

C G T A C G T A G T A C C G T A C T G A A G T C C T G A C T G A T A G C T C G A
Reverse Opposite:
A G C T A T C G A G C T A G C T C T A G A G C T A C G T A C T G G C A T C G A T
p-value:1e-9
log p-value:-2.091e+01
Information Content per bp:1.763
Number of Target Sequences with motif152.0
Percentage of Target Sequences with motif32.62%
Number of Background Sequences with motif8108.4
Percentage of Background Sequences with motif20.50%
Average Position of motif in Targets538.3 +/- 266.9bp
Average Position of motif in Background531.5 +/- 313.5bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

fkh-9/MA1440.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:AACAAYAACA
AAAAACAA--
 C G T A C G T A G T A C C G T A C T G A A G T C C T G A C T G A T A G C T C G A
T C G A G C T A G C T A G T C A C G T A G A T C C G T A C G T A A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AACAAYAACA
AACAAT----
 C G T A C G T A G T A C C G T A C T G A A G T C C T G A C T G A T A G C T C G A
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

fkh-2/MA0920.1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AACAAYAACA
GTAAACAA-----
 A C G T A C G T A C G T C G T A C G T A G T A C C G T A C T G A A G T C C T G A C T G A T A G C T C G A
C T A G C G A T G T C A C G T A C G T A G T A C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

POL007.1_BREd/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AACAAYAACA
NANANAC----
 A C G T C G T A C G T A G T A C C G T A C T G A A G T C C T G A C T G A T A G C T C G A
T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AACAAYAACA
AAATAAACA---
 A C G T A C G T C G T A C G T A G T A C C G T A C T G A A G T C C T G A C T G A T A G C T C G A
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T

ceh-48/MA0921.1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AACAAYAACA
AATCGATAA--
 A C G T C G T A C G T A G T A C C G T A C T G A A G T C C T G A C T G A T A G C T C G A
C T G A C G T A A G C T G T A C C T A G G C T A C G A T G C T A G C T A A C G T A C G T

ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AACAAYAACA
AWTGATAAGA
 C G T A C G T A G T A C C G T A C T G A A G T C C T G A C T G A T A G C T C G A
C G T A C G T A G C A T A C T G C G T A A G C T C T G A C G T A T A C G C T G A

blmp-1/MA0537.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AACAAYAACA-
AAAAGTGAAAA
 C G T A C G T A G T A C C G T A C T G A A G T C C T G A C T G A T A G C T C G A A C G T
C T G A C T G A C T G A C T G A C T A G C G A T A C T G C G T A C T G A C T G A T C G A

PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---AACAAYAACA
GCAAACAM-----
 A C G T A C G T A C G T C G T A C G T A G T A C C G T A C T G A A G T C C T G A C T G A T A G C T C G A
C T A G A G T C C G T A G T C A C G T A A G T C C G T A G T A C A C G T A C G T A C G T A C G T A C G T

ceh-38/MA1699.1/Jaspar

Match Rank:10
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------AACAAYAACA
AAAAAAATCGATAATT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C C G T A C T G A A G T C C T G A C T G A T A G C T C G A
G T C A C T G A C T G A C G T A G C T A C G T A C T G A G A C T G A T C C T A G C T G A G C A T G T C A G C T A G C A T G C A T