Information for 11-GACCCGATGA (Motif 18)

C A T G G C T A G A T C G T A C A T G C T A C G G C T A C G A T A C T G C G T A
Reverse Opposite:
G C A T T G A C G C T A C G A T A T G C T A C G C A T G C T A G C G A T G T A C
p-value:1e-9
log p-value:-2.144e+01
Information Content per bp:1.601
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif6.22%
Number of Background Sequences with motif600.9
Percentage of Background Sequences with motif1.52%
Average Position of motif in Targets535.2 +/- 230.7bp
Average Position of motif in Background492.4 +/- 317.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0001.1_ETS_class/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GACCCGATGA
-ACCGGAAG-
 C A T G G C T A G A T C G T A C A T G C T A C G G C T A C G A T A C T G C G T A
A C G T C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T

PL0012.1_hlh-2::hlh-8/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GACCCGATGA----
NANACCAGATGTTTNN
 A C G T A C G T C A T G G C T A G A T C G T A C A T G C T A C G G C T A C G A T A C T G C G T A A C G T A C G T A C G T A C G T
C A T G T G C A G C A T C T G A T G A C T G A C C G T A A C T G T C G A A C G T C A T G A C G T A C G T A C G T T C G A G A C T

skn-1/MA0547.1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GACCCGATGA-----
AAAATGATGACAATT
 C A T G G C T A G A T C G T A C A T G C T A C G G C T A C G A T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C T G A C T G A C G T A G A C T A T C G G T C A C G A T A C T G C G T A G A T C C G T A C G T A C G A T C G A T

PL0001.1_hlh-11/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GACCCGATGA---
TCTGATCAGCTGATCG
 A C G T A C G T A C G T C A T G G C T A G A T C G T A C A T G C T A C G G C T A C G A T A C T G C G T A A C G T A C G T A C G T
C G A T G A C T G A C T C T A G T C G A G C A T G T A C C G T A A T C G T A G C G A C T A C T G C G T A A C G T T A G C C A T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GACCCGATGA
TGACCT-----
 A C G T C A T G G C T A G A T C G T A C A T G C T A C G G C T A C G A T A C T G C G T A
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GACCCGATGA
ACTAGCCAATCA
 A C G T A C G T C A T G G C T A G A T C G T A C A T G C T A C G G C T A C G A T A C T G C G T A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

POL002.1_INR/Jaspar

Match Rank:7
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GACCCGATGA
--NNNANTGA
 C A T G G C T A G A T C G T A C A T G C T A C G G C T A C G A T A C T G C G T A
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

atf-7/MA1438.1/Jaspar

Match Rank:8
Score:0.47
Offset:5
Orientation:forward strand
Alignment:GACCCGATGA-----
-----AATGACGTCA
 C A T G G C T A G A T C G T A C A T G C T A C G G C T A C G A T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A G A C T T A C G C G T A A G T C T C A G G A C T T A G C T G C A

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.46
Offset:4
Orientation:reverse strand
Alignment:GACCCGATGA
----NGAAGC
 C A T G G C T A G A T C G T A C A T G C T A C G G C T A C G A T A C T G C G T A
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

zip-8/MA1704.1/Jaspar

Match Rank:10
Score:0.45
Offset:4
Orientation:forward strand
Alignment:GACCCGATGA-----
----TTATGACGTCA
 C A T G G C T A G A T C G T A C A T G C T A C G G C T A C G A T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C A G T T C G A G C A T C A T G C T G A G A T C T A C G G A C T T G A C C T G A