Information for 8-AGCGGAATKTCG (Motif 13)

G C T A C T A G G A T C A C T G C T A G G T C A C G T A G A C T A C G T A G C T A G T C A T C G
Reverse Opposite:
A T G C A C T G C T G A T G C A C T G A G C A T A C G T A G T C G T A C C T A G G A T C C G A T
p-value:1e-11
log p-value:-2.591e+01
Information Content per bp:1.716
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif8.80%
Number of Background Sequences with motif965.1
Percentage of Background Sequences with motif2.44%
Average Position of motif in Targets568.2 +/- 275.4bp
Average Position of motif in Background543.9 +/- 325.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GEI-11(Myb?)/cElegans-L4-GEI11-ChIP-Seq(modEncode)/Homer

Match Rank:1
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGCGGAATKTCG-
CCCGTRARRTGTCGG
 A C G T A C G T G C T A C T A G G A T C A C T G C T A G G T C A C G T A G A C T A C G T A G C T A G T C A T C G A C G T
G T A C A G T C G A T C T C A G A G C T C T A G C T G A C T A G C T A G G A C T C T A G G C A T G T A C A T C G A C T G

MF0001.1_ETS_class/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGCGGAATKTCG
ACCGGAAG----
 G C T A C T A G G A T C A C T G C T A G G T C A C G T A G A C T A C G T A G C T A G T C A T C G
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGCGGAATKTCG
--GGGGATTTCC
 G C T A C T A G G A T C A C T G C T A G G T C A C G T A G A C T A C G T A G C T A G T C A T C G
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

cebp-1/MA1444.1/Jaspar

Match Rank:4
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AGCGGAATKTCG------
------ATTTCGTAATAT
 G C T A C T A G G A T C A C T G C T A G G T C A C G T A G A C T A C G T A G C T A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T G C A T G A C T G T A C C T A G G A C T G T C A C G T A G A C T C G T A G C A T

lin-54/MA1450.1/Jaspar

Match Rank:5
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AGCGGAATKTCG
AAATTTGAATTTCC
 A C G T A C G T G C T A C T A G G A T C A C T G C T A G G T C A C G T A G A C T A C G T A G C T A G T C A T C G
G T C A G C T A C G T A G C A T C G A T A G C T C T A G G T C A C T G A G C A T G C A T G A C T A G T C A G T C

snpc-4/MA0544.1/Jaspar

Match Rank:6
Score:0.47
Offset:6
Orientation:forward strand
Alignment:AGCGGAATKTCG------
------GTGTCGGCCGCT
 G C T A C T A G G A T C A C T G C T A G G T C A C G T A G A C T A C G T A G C T A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C T G G A C T G T A C A C T G C A T G A G T C A G T C C T A G A G T C G A C T

efl-1/MA0541.1/Jaspar

Match Rank:7
Score:0.45
Offset:5
Orientation:reverse strand
Alignment:AGCGGAATKTCG--------
-----AATTTCGCGCGNNNN
 G C T A C T A G G A T C A C T G C T A G G T C A C G T A G A C T A C G T A G C T A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A G C A T A G C T C A G T A T G C A T C G A G T C A C T G A G T C A T C G G T A C C T A G G A T C C A T G

mab-3/MA0262.1/Jaspar

Match Rank:8
Score:0.45
Offset:5
Orientation:forward strand
Alignment:AGCGGAATKTCG------
-----AATGTTGCGAATT
 G C T A C T A G G A T C A C T G C T A G G T C A C G T A G A C T A C G T A G C T A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G T A A G C T A C T G A C G T A C G T A C T G A G T C T A C G C G T A C G T A C G A T A C G T

MA0262.1_mab-3/Jaspar

Match Rank:9
Score:0.45
Offset:5
Orientation:forward strand
Alignment:AGCGGAATKTCG------
-----AATGTTGCGAATT
 G C T A C T A G G A T C A C T G C T A G G T C A C G T A G A C T A C G T A G C T A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G T A A G C T A C T G A C G T A C G T A C T G A G T C T A C G C G T A C G T A C G A T A C G T

nhr-6/MA1451.1/Jaspar

Match Rank:10
Score:0.45
Offset:4
Orientation:forward strand
Alignment:AGCGGAATKTCG
----AAAGGTCA
 G C T A C T A G G A T C A C T G C T A G G T C A C G T A G A C T A C G T A G C T A G T C A T C G
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A