Information for 7-ATAWTATTAT (Motif 12)

C G T A A C G T C G T A C G A T C G A T C G T A C G A T G C A T C G T A C G A T
Reverse Opposite:
C G T A C G A T C G T A C G T A C G A T C G T A C G T A A C G T T G C A C G A T
p-value:1e-11
log p-value:-2.595e+01
Information Content per bp:1.738
Number of Target Sequences with motif308.0
Percentage of Target Sequences with motif66.09%
Number of Background Sequences with motif19894.8
Percentage of Background Sequences with motif50.29%
Average Position of motif in Targets527.9 +/- 289.1bp
Average Position of motif in Background516.9 +/- 314.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.47
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATAWTATTAT
-AATTATT--
 C G T A A C G T C G T A C G A T C G A T C G T A C G A T G C A T C G T A C G A T
A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T

lim-7/MA1441.1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ATAWTATTAT
NGCAATTAAGN-
 A C G T A C G T C G T A A C G T C G T A C G A T C G A T C G T A C G A T G C A T C G T A C G A T
C G T A A C T G G T A C G T C A C G T A C G A T C G A T C G T A G T C A A C T G C G T A A C G T

fkh-9/MA1440.1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ATAWTATTAT-
---TTGTTTTT
 C G T A A C G T C G T A C G A T C G A T C G T A C G A T G C A T C G T A C G A T A C G T
A C G T A C G T A C G T C G A T C G A T C T A G A C G T A C G T C G A T C G A T A C G T

elt-3/MA0542.1/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:ATAWTATTAT--
----TCTTATCA
 C G T A A C G T C G T A C G A T C G A T C G T A C G A T G C A T C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C C G T A

ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ATAWTATTAT-
-TCTTATCAWT
 C G T A A C G T C G T A C G A T C G A T C G T A C G A T G C A T C G T A C G A T A C G T
A C G T G A C T A T G C G C A T G A C T C T G A A C G T A G T C C G T A G C A T G C A T

CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ATAWTATTAT---
-AAATTSAATTTN
 C G T A A C G T C G T A C G A T C G A T C G T A C G A T G C A T C G T A C G A T A C G T A C G T A C G T
A C G T G C T A C T G A C G T A A G C T A G C T A T C G T C G A C T G A A C G T G A C T C G A T A C T G

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ATAWTATTAT
--ATTGTT--
 C G T A A C G T C G T A C G A T C G A T C G T A C G A T G C A T C G T A C G A T
A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T

PQM-1(?)/cElegans-L3-ChIP-Seq(modEncode)/Homer

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:ATAWTATTAT----
----TCTTATCAGT
 C G T A A C G T C G T A C G A T C G A T C G T A C G A T G C A T C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T G C G A C T C G A T C G T A A C G T A G T C C G T A C T A G G A C T

elt-2/MA1701.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:ATAWTATTAT---
---TTCTTATCAG
 C G T A A C G T C G T A C G A T C G A T C G T A C G A T G C A T C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A G C T T G A C A G C T C G A T C G T A G A C T G T A C C G T A T C A G

mab-5/MA1442.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:ATAWTATTAT
TAATTAAT--
 C G T A A C G T C G T A C G A T C G A T C G T A C G A T G C A T C G T A C G A T
G A C T G C T A G C T A C G A T A C G T C G T A C T G A A C G T A C G T A C G T