Information for 5-CAGCACGG (Motif 11)

A G T C G T C A A T C G G A T C T C G A T G A C A C T G A T C G
Reverse Opposite:
T A G C G T A C A C T G A G C T C T A G A T G C C A G T C T A G
p-value:1e-11
log p-value:-2.607e+01
Information Content per bp:1.798
Number of Target Sequences with motif99.0
Percentage of Target Sequences with motif21.24%
Number of Background Sequences with motif4077.1
Percentage of Background Sequences with motif10.31%
Average Position of motif in Targets444.1 +/- 282.5bp
Average Position of motif in Background483.9 +/- 330.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CAGCACGG
CACAGN----
 A C G T A C G T A G T C G T C A A T C G G A T C T C G A T G A C A C T G A T C G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGCACGG
CAGCC---
 A G T C G T C A A T C G G A T C T C G A T G A C A C T G A T C G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CAGCACGG
TCAGTCTT-
 A C G T A G T C G T C A A T C G G A T C T C G A T G A C A C T G A T C G
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T

PL0014.1_mxl-1::mdl-1/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CAGCACGG------
NNTNGCACGTGCTNNA
 A C G T A C G T A G T C G T C A A T C G G A T C T C G A T G A C A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C G A T A C G T T G C A A T C G A G T C C T G A A G T C C T A G C G A T A C T G A T C G G A C T G C T A G C A T C T G A

PL0016.1_ref-1/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CAGCACGG------
TCAAGGCACGTGCCTTA
 A C G T A C G T A C G T A G T C G T C A A T C G G A T C T C G A T G A C A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T G A C G C T A G C T A C T A G T C A G A G T C C T G A A G T C C T A G A G C T A C T G A G T C G A T C G C A T C G A T C G T A

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:6
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CAGCACGG-
-ACCACGTG
 A G T C G T C A A T C G G A T C T C G A T G A C A C T G A T C G A C G T
A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G

lin-14/MA0261.1/Jaspar

Match Rank:7
Score:0.47
Offset:2
Orientation:forward strand
Alignment:CAGCACGG
--GAACAC
 A G T C G T C A A T C G G A T C T C G A T G A C A C T G A T C G
A C G T A C G T A C T G C G T A C G T A A G T C C T G A A G T C

MA0261.1_lin-14/Jaspar

Match Rank:8
Score:0.47
Offset:2
Orientation:forward strand
Alignment:CAGCACGG
--GAACAC
 A G T C G T C A A T C G G A T C T C G A T G A C A C T G A T C G
A C G T A C G T A C T G C G T A C G T A A G T C C T G A A G T C

PL0013.1_hlh-2::hlh-15/Jaspar

Match Rank:9
Score:0.47
Offset:-4
Orientation:forward strand
Alignment:----CAGCACGG----
GGACCAGCTGGGCCCT
 A C G T A C G T A C G T A C G T A G T C G T C A A T C G G A T C T C G A T G A C A C T G A T C G A C G T A C G T A C G T A C G T
C T A G T C A G G T C A T A G C G A T C C G T A A T C G T A G C A C G T A C T G A T C G C A T G A T G C G T A C T G A C A C G T

PL0007.1_mxl-3/Jaspar

Match Rank:10
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--CAGCACGG------
CGGACCACGTGGTCCG
 A C G T A C G T A G T C G T C A A T C G G A T C T C G A T G A C A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C T A G C A T G T C G A T G A C G T A C C G T A A G T C C T A G G A C T A C T G A C T G G A C T A G T C G T A C C T A G