Information for 1-AWCGMGCG (Motif 1)

C G T A C G T A T A G C A C T G G T A C A C T G T A G C C T A G
Reverse Opposite:
G A T C A T C G G T A C C A T G G T A C A T C G G C A T C G A T
p-value:1e-16
log p-value:-3.724e+01
Information Content per bp:1.669
Number of Target Sequences with motif293.0
Percentage of Target Sequences with motif62.88%
Number of Background Sequences with motif17240.0
Percentage of Background Sequences with motif43.58%
Average Position of motif in Targets510.9 +/- 277.1bp
Average Position of motif in Background523.7 +/- 346.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.51
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AWCGMGCG
TAGCGCGC-
 A C G T C G T A C G T A T A G C A C T G G T A C A C T G T A G C C T A G
C G A T C T G A C T A G G T A C A C T G A G T C C T A G A G T C A C G T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AWCGMGCG
AGCGCGCC
 C G T A C G T A T A G C A C T G G T A C A C T G T A G C C T A G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

efl-1/MA0541.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AWCGMGCG-----
CGCGCGCGCGAAATT
 A C G T A C G T C G T A C G T A T A G C A C T G G T A C A C T G T A G C C T A G A C G T A C G T A C G T A C G T A C G T
G T A C C T A G G A T C C A T G T A G C T C A G T G A C A C T G A T G C T A C G G T C A T C G A C G T A G C A T A G C T

EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AWCGMGCG---
TGCAARYGCGCTCYA
 A C G T A C G T A C G T A C G T C G T A C G T A T A G C A C T G G T A C A C T G T A G C C T A G A C G T A C G T A C G T
G C A T C A T G G T A C C T G A C G T A C T G A A G T C C T A G A G T C A C T G A G T C A G C T A G T C A G T C C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AWCGMGCG
---CAGCC
 C G T A C G T A T A G C A C T G G T A C A C T G T A G C C T A G
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

LIN-15B(Zf)/cElegans-L3-LIN15B-ChIP-Seq(modEncode)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AWCGMGCG----------
CARTGGAGCGCRYTTGCATT
 A C G T A C G T C G T A C G T A T A G C A C T G G T A C A C T G T A G C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T C G A C T G A G A C T T C A G T C A G T C G A A C T G A G T C C T A G G A T C T C A G A G T C G C A T G A C T C A T G G A T C C G T A A G C T G A C T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AWCGMGCG
-CGGAGC-
 C G T A C G T A T A G C A C T G G T A C A C T G T A G C C T A G
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AWCGMGCG-----
---GGGCGGGACC
 C G T A C G T A T A G C A C T G G T A C A C T G T A G C C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

dpy-27/MA0540.1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AWCGMGCG------
TTATCGCGCAGGGANA
 A C G T A C G T C G T A C G T A T A G C A C T G G T A C A C T G T A G C C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G C A T G C T A C G A T A G T C C T A G A G T C A C T G G T A C C G T A A C T G A C T G C T A G G T C A T A C G T C G A

ceh-48/MA0921.1/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--AWCGMGCG
NTATCGATN-
 A C G T A C G T C G T A C G T A T A G C A C T G G T A C A C T G T A G C C T A G
C G A T C G A T C G T A C G A T G A T C C A T G C T G A G C A T G A C T A C G T